The BioArray Software Environment (BASE) has been developed at the University of Lund, Sweden, and functions as a comprehensive database and laboratory information management system (LIMS) for storage and retrival of information and data from microarray experiments. In addition, BASE offers a framework for data processing and analysis.

In short, BASE stores and retrieves biomaterial information, raw data and images, and provides integrated and "plug-in"-able normalization, data viewing and analysis tools. Additionally, for labs that make their own in-house arrays or for labs that wish to track probe information, the system also has array production LIMS features which can be integrated with the data analysis. The organization and interface of BASE was designed to closely follow the natural work-flow of the microarray biologist, and is compatible with most types of array platforms and datatypes (e.g. cDNA/oligos spotted on any substrate, Affymetrix, CGH on arrays, etc).

NMC intends to use and develop BASE as a stable, reliable, and well structured storage facility for Norwegian academic researchers, to ensure safety of valuable experimental data and results. We offer access to a local BASE server as well as training through courses and individual guidance on how to use BASE.

To access BASE in your local region please click on the link below, or contact the relevant local NMC node for registration as a new user (see "BASE" under the local web pages).

BASE (NTNU): http://base.microarray.ntnu.no/

BASE (UiB): http://base.cbu.uib.no